Source code for km3pipe.utils.km3h5concat

# Filename: km3h5concat.py
"""
Concatenate KM3HDF5 files via pipeline.

Usage:
    km3h5concat [options] OUTFILE FILE...
    km3h5concat (-h | --help)
    km3h5concat --version

Options:
    -h --help                       Show this screen.
    --verbose                       Print more output.
    --debug                         Print everything.
    -n=NEVENTS                      Number of events; if not given, use all.
"""

from km3modules.common import StatusBar
from km3pipe import version
from km3pipe import logger

__author__ = "Moritz Lotze"
__copyright__ = "Copyright 2016, Tamas Gal and the KM3NeT collaboration."
__credits__ = []
__license__ = "MIT"
__maintainer__ = "Moritz Lotze"
__email__ = "mlotze@km3net.de"
__status__ = "Development"

[docs]log = logger.get_logger('km3pipe.io')
[docs]def km3h5concat(input_files, output_file, n_events=None, **kwargs): """Concatenate KM3HDF5 files via pipeline.""" from km3pipe import Pipeline # noqa from km3pipe.io import HDF5Pump, HDF5Sink # noqa pipe = Pipeline() pipe.attach(HDF5Pump, filenames=input_files, **kwargs) pipe.attach(StatusBar, every=250) pipe.attach(HDF5Sink, filename=output_file, **kwargs) pipe.drain(n_events)
[docs]def main(): from docopt import docopt args = docopt(__doc__, version=version) try: n = int(args['-n']) except TypeError: n = None # FILE... (ellipsis) always returns a list in docopt. # so the bug checking-string-length should not happen here infiles = args['FILE'] outfile = args['OUTFILE'] is_verbose = bool(args['--verbose']) if is_verbose: log.setLevel('INFO') is_debug = bool(args['--debug']) if is_debug: log.setLevel('DEBUG') km3h5concat(infiles, outfile, n)